Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdhga6Q91XY2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Gm42997-202ENSMUST00000200321 985 ntBASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhga6Q91XY2 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm17330-201ENSMUST00000221047 165 ntBASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhga6Q91XY2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms