Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.92□□□□□ -0.34
Usb1Q91W78 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.92□□□□□ -0.34
Usb1Q91W78 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.92□□□□□ -0.34
Usb1Q91W78 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usb1Q91W78 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.92□□□□□ -0.34
Usb1Q91W78 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Usb1Q91W78 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Usb1Q91W78 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usb1Q91W78 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usb1Q91W78 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Gm13612-201ENSMUST00000119276 390 ntBASIC12.91□□□□□ -0.34
Usb1Q91W78 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Mir7221-201ENSMUST00000184009 72 ntBASIC12.91□□□□□ -0.34
Usb1Q91W78 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.91□□□□□ -0.34
Usb1Q91W78 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Usb1Q91W78 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Usb1Q91W78 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.9□□□□□ -0.34
Usb1Q91W78 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Gm25927-201ENSMUST00000175058 117 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.9□□□□□ -0.34
Usb1Q91W78 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Usb1Q91W78 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.9□□□□□ -0.34
Usb1Q91W78 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Usb1Q91W78 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Usb1Q91W78 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Usb1Q91W78 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Usb1Q91W78 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.89□□□□□ -0.35
Usb1Q91W78 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Usb1Q91W78 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Usb1Q91W78 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.89□□□□□ -0.35
Usb1Q91W78 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms