Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 AA914427-201ENSMUST00000193194 1166 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm4768-201ENSMUST00000206199 686 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.88□□□□□ -0.35
Vsx1Q91V10 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.88□□□□□ -0.35
Vsx1Q91V10 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm20426-201ENSMUST00000173657 440 ntBASIC12.87□□□□□ -0.35
Vsx1Q91V10 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.87□□□□□ -0.35
Vsx1Q91V10 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vsx1Q91V10 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.87□□□□□ -0.35
Vsx1Q91V10 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.86□□□□□ -0.35
Vsx1Q91V10 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm15276-201ENSMUST00000145953 498 ntBASIC12.86□□□□□ -0.35
Vsx1Q91V10 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Mir1943-201ENSMUST00000158276 73 ntBASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm27023-201ENSMUST00000182372 285 ntBASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.86□□□□□ -0.35
Vsx1Q91V10 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vsx1Q91V10 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms