Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm10766-202ENSMUST00000194123 606 ntBASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm5425-201ENSMUST00000214125 459 ntBASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.6□□□□□ -0.39
Pcdh18Q8VHR0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Gm38294-201ENSMUST00000192831 381 ntBASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Pcdh18Q8VHR0 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh18Q8VHR0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pcdh18Q8VHR0 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh18Q8VHR0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdh18Q8VHR0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdh18Q8VHR0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms