Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Gm25261-201ENSMUST00000157416 134 ntBASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Gm10608-202ENSMUST00000213924 676 ntBASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Zcchc9Q8R1J3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zcchc9Q8R1J3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zcchc9Q8R1J3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Zcchc9Q8R1J3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm16379-201ENSMUST00000161469 348 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm8762-201ENSMUST00000193486 339 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Zcchc9Q8R1J3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm15236-201ENSMUST00000117309 379 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm16202-201ENSMUST00000117532 544 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm45865-201ENSMUST00000211815 945 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Zcchc9Q8R1J3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms