Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Gm8805-201ENSMUST00000117848 313 ntBASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Gm7067-201ENSMUST00000207698 1249 ntBASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.36■□□□□ 0.05
Atf7Q8R0S1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm11814-201ENSMUST00000119515 929 ntBASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm8652-201ENSMUST00000181363 964 ntBASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Atf7Q8R0S1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Gm12203-201ENSMUST00000118235 598 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Gm12209-201ENSMUST00000120089 596 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Gm37497-201ENSMUST00000195830 798 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Atf7Q8R0S1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms