Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm24749-201ENSMUST00000157838 343 ntBASIC14.67□□□□□ -0.06
Syne4Q8CII8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Rprl1-202ENSMUST00000198476 238 ntBASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.67□□□□□ -0.06
Syne4Q8CII8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Syne4Q8CII8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.66□□□□□ -0.06
Syne4Q8CII8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.66□□□□□ -0.06
Syne4Q8CII8 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.66□□□□□ -0.06
Syne4Q8CII8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Syne4Q8CII8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 Gm9550-201ENSMUST00000161130 862 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Gm5070-201ENSMUST00000177599 862 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.65□□□□□ -0.06
Syne4Q8CII8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.65□□□□□ -0.06
Syne4Q8CII8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms