Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm11803-201ENSMUST00000119966 444 ntBASIC13.32□□□□□ -0.28
CopaQ8CIE6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.32□□□□□ -0.28
CopaQ8CIE6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Gm27731-201ENSMUST00000185192 107 ntBASIC13.32□□□□□ -0.28
CopaQ8CIE6 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.32□□□□□ -0.28
CopaQ8CIE6 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CopaQ8CIE6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm6152-201ENSMUST00000151704 340 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Snora78-201ENSMUST00000158630 128 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.31□□□□□ -0.28
CopaQ8CIE6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm15770-201ENSMUST00000117498 584 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm24644-201ENSMUST00000157114 139 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm29608-201ENSMUST00000190444 463 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm45841-201ENSMUST00000207700 164 ntBASIC13.3□□□□□ -0.28
CopaQ8CIE6 Gm17330-201ENSMUST00000221047 165 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms