Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip3Q8CHD8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Gm27320-201ENSMUST00000184892 109 ntBASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip3Q8CHD8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Gm37259-201ENSMUST00000193903 849 ntBASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip3Q8CHD8 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Gm14726-201ENSMUST00000120623 896 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Gm20482-202ENSMUST00000174729 825 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Mir339-201ENSMUST00000083659 96 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab11fip3Q8CHD8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms