Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm6447-201ENSMUST00000118905 835 ntBASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm27618-201ENSMUST00000183671 60 ntBASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm38294-201ENSMUST00000192831 381 ntBASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lysmd4Q8CC84 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm23935-201ENSMUST00000102303 57 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm24270-201ENSMUST00000102326 57 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm4875-201ENSMUST00000118257 786 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm24245-201ENSMUST00000157318 57 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm43575-201ENSMUST00000196420 516 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lysmd4Q8CC84 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm13453-201ENSMUST00000118708 357 ntBASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.66□□□□□ -0.54
Lysmd4Q8CC84 Gm26464-201ENSMUST00000157094 305 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms