Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm43118-201ENSMUST00000199149 775 ntBASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm5781-201ENSMUST00000219792 443 ntBASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Alx1Q8C8B0 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm38158-201ENSMUST00000194617 339 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm42693-201ENSMUST00000196779 631 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm43133-201ENSMUST00000197472 463 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Alx1Q8C8B0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm8738-201ENSMUST00000172606 329 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm9899-201ENSMUST00000065519 555 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.14■□□□□ 0.01
Alx1Q8C8B0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms