Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Gm43818-201ENSMUST00000200605 466 ntBASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ccdc60Q8C4J0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Gm26185-201ENSMUST00000157692 266 ntBASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ccdc60Q8C4J0 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ccdc60Q8C4J0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm13226-201ENSMUST00000117838 404 ntBASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm11637-201ENSMUST00000120601 592 ntBASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm1335-201ENSMUST00000121653 386 ntBASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ccdc60Q8C4J0 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms