Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gm23270-201ENSMUST00000104055 131 ntBASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ptcd1Q8C2E4 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.02■□□□□ 0.16
Ptcd1Q8C2E4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.02■□□□□ 0.15
Ptcd1Q8C2E4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Gm28386-201ENSMUST00000189147 1849 ntBASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Gm28693-202ENSMUST00000190758 331 ntBASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 AU022133-201ENSMUST00000200601 873 ntBASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ptcd1Q8C2E4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Gm17208-201ENSMUST00000168388 535 ntBASIC16■□□□□ 0.15
Ptcd1Q8C2E4 Gm43378-201ENSMUST00000199336 582 ntBASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms