Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim35Q8C006 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim35Q8C006 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim35Q8C006 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trim35Q8C006 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.33□□□□□ -0.11
Trim35Q8C006 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim35Q8C006 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim35Q8C006 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trim35Q8C006 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim35Q8C006 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm44436-201ENSMUST00000204200 1494 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim35Q8C006 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Mir3473a-201ENSMUST00000175011 78 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm44585-201ENSMUST00000207150 607 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim35Q8C006 AC167202.1-201ENSMUST00000219027 331 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 CT009765.2-201ENSMUST00000221331 392 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm17415-201ENSMUST00000096427 789 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.33□□□□□ -0.12
Trim35Q8C006 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trim35Q8C006 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim35Q8C006 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm37396-201ENSMUST00000191827 1495 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim35Q8C006 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm16558-201ENSMUST00000163015 532 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm18303-201ENSMUST00000190055 1176 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm18984-201ENSMUST00000193998 1124 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm43245-201ENSMUST00000197603 468 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim35Q8C006 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim35Q8C006 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.32□□□□□ -0.12
Trim35Q8C006 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim35Q8C006 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms