Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm11941-201ENSMUST00000119904 610 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm9166-201ENSMUST00000120293 561 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm21811-201ENSMUST00000096485 930 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm44329-201ENSMUST00000197469 112 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm17812-201ENSMUST00000204935 318 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Chd9Q8BYH8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm12502-201ENSMUST00000120197 444 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Mir1956-201ENSMUST00000157748 65 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm28388-201ENSMUST00000186262 437 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm2517-201ENSMUST00000215651 348 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Grk6-205ENSMUST00000224653 2976 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Ginm1-202ENSMUST00000065124 300 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Gm19863-201ENSMUST00000192480 2218 ntBASIC10.11□□□□□ -0.79
Chd9Q8BYH8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Chd9Q8BYH8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.1□□□□□ -0.79
Chd9Q8BYH8 Gm42657-201ENSMUST00000201746 211 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms