Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Trerf1Q8BXJ2 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm15678-201ENSMUST00000117573 960 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm27701-201ENSMUST00000184498 110 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm24447-201ENSMUST00000083977 338 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trerf1Q8BXJ2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm11478-201ENSMUST00000117851 599 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm17330-201ENSMUST00000221047 165 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trerf1Q8BXJ2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trerf1Q8BXJ2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trerf1Q8BXJ2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trerf1Q8BXJ2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms