Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm19931-201ENSMUST00000198920 368 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm44855-201ENSMUST00000205725 362 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm6218-201ENSMUST00000219812 628 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cpne3Q8BT60 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cpne3Q8BT60 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.58□□□□□ -0.4
Cpne3Q8BT60 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms