Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm9719-201ENSMUST00000162765 543 ntBASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Dupd1-202ENSMUST00000224735 548 ntBASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco3Q8BQM7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Gm13015-201ENSMUST00000118674 204 ntBASIC10.71□□□□□ -0.69
Smco3Q8BQM7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.71□□□□□ -0.69
Smco3Q8BQM7 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco3Q8BQM7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
Smco3Q8BQM7 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco3Q8BQM7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms