Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.32□□□□□ -0.28
Sfr1Q8BP27 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sfr1Q8BP27 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm44069-201ENSMUST00000204898 506 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sfr1Q8BP27 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm11803-201ENSMUST00000119966 444 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm29649-201ENSMUST00000185649 419 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm43433-201ENSMUST00000196573 481 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sfr1Q8BP27 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms