Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf38Q8BI21 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm11524-201ENSMUST00000119349 807 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm16215-201ENSMUST00000161990 637 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm19931-201ENSMUST00000198920 368 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf38Q8BI21 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm13689-201ENSMUST00000119360 685 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Mir6977-201ENSMUST00000184960 64 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm7063-201ENSMUST00000186840 981 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm7730-201ENSMUST00000212486 454 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf38Q8BI21 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms