Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Mir7221-201ENSMUST00000184009 72 ntBASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Gm45841-201ENSMUST00000207700 164 ntBASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.28□□□□□ -0.44
Clrn3Q8BHH8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.44
Clrn3Q8BHH8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm12091-201ENSMUST00000146791 830 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm29608-201ENSMUST00000190444 463 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Clrn3Q8BHH8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm5687-201ENSMUST00000118252 640 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Gm28911-201ENSMUST00000188837 117 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Itm2b-204ENSMUST00000228637 783 ntBASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Clrn3Q8BHH8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms