Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm24543-201ENSMUST00000103867 82 ntBASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Slc5a7Q8BGY9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gm5425-201ENSMUST00000214125 459 ntBASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Slc5a7Q8BGY9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gm15393-201ENSMUST00000120499 219 ntBASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Mir1897-201ENSMUST00000122581 272 ntBASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Slc5a7Q8BGY9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms