Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Daam2-202ENSMUST00000224595 1926 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp6nlQ80XC3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gm4909-201ENSMUST00000118749 794 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gm8885-201ENSMUST00000189382 598 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gm43138-201ENSMUST00000199123 708 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gm18212-201ENSMUST00000211678 889 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Nsd1-205ENSMUST00000224693 852 ntBASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Usp6nlQ80XC3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm11439-201ENSMUST00000118598 409 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm27341-201ENSMUST00000183570 106 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gm5904-201ENSMUST00000210286 865 ntBASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp6nlQ80XC3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.33□□□□□ -0.11
Usp6nlQ80XC3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp6nlQ80XC3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Usp6nlQ80XC3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp6nlQ80XC3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Usp6nlQ80XC3 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms