Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc116Q80X53 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Gm44882-201ENSMUST00000205702 802 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Gm18473-201ENSMUST00000220543 868 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc116Q80X53 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Gm12928-201ENSMUST00000117115 573 ntBASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.76□□□□□ -0.37
Ccdc116Q80X53 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Gm8598-201ENSMUST00000221184 836 ntBASIC12.76□□□□□ -0.37
Ccdc116Q80X53 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc116Q80X53 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc116Q80X53 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms