Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm2546-201ENSMUST00000182630 991 ntBASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.3■□□□□ 0.04
Ube3cQ80U95 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm5904-201ENSMUST00000210286 865 ntBASIC15.3■□□□□ 0.04
Ube3cQ80U95 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.3■□□□□ 0.04
Ube3cQ80U95 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube3cQ80U95 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Gm13813-201ENSMUST00000120998 787 ntBASIC15.29■□□□□ 0.04
Ube3cQ80U95 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.29■□□□□ 0.04
Ube3cQ80U95 Gm14381-201ENSMUST00000122105 414 ntBASIC15.29■□□□□ 0.04
Ube3cQ80U95 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Gm26083-201ENSMUST00000157904 193 ntBASIC15.29■□□□□ 0.04
Ube3cQ80U95 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.29■□□□□ 0.04
Ube3cQ80U95 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube3cQ80U95 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Gm14726-201ENSMUST00000120623 896 ntBASIC15.28■□□□□ 0.04
Ube3cQ80U95 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC15.28■□□□□ 0.04
Ube3cQ80U95 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Ube3cQ80U95 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube3cQ80U95 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Ube3cQ80U95 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Ube3cQ80U95 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3cQ80U95 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ube3cQ80U95 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3cQ80U95 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3cQ80U95 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.27■□□□□ 0.04
Ube3cQ80U95 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3cQ80U95 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube3cQ80U95 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms