Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ctdp1Q7TSG2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ctdp1Q7TSG2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Ctdp1Q7TSG2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Ctdp1Q7TSG2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctdp1Q7TSG2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctdp1Q7TSG2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Pck2-205ENSMUST00000226352 2784 ntBASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Gm22189-201ENSMUST00000103822 86 ntBASIC14.18□□□□□ -0.14
Ctdp1Q7TSG2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms