Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TwistnbQ78WZ7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm5425-201ENSMUST00000214125 459 ntBASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TwistnbQ78WZ7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm11779-201ENSMUST00000118541 368 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm44335-201ENSMUST00000196879 141 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm44297-201ENSMUST00000198304 141 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm44346-201ENSMUST00000198851 141 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TwistnbQ78WZ7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TwistnbQ78WZ7 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms