Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcc2Q6PDG5 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.21■□□□□ 0.02
Smarcc2Q6PDG5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Smarcc2Q6PDG5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcc2Q6PDG5 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm18062-201ENSMUST00000208020 547 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm18055-201ENSMUST00000208254 547 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm8598-201ENSMUST00000221184 836 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm10012-201ENSMUST00000078252 192 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Gm6091-201ENSMUST00000098307 165 ntBASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcc2Q6PDG5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gm11803-201ENSMUST00000119966 444 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gm44069-201ENSMUST00000204898 506 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gm7561-201ENSMUST00000211203 886 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcc2Q6PDG5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm11425-201ENSMUST00000119608 498 ntBASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Smarcc2Q6PDG5 Gm8810-201ENSMUST00000172895 754 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms