Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm11524-201ENSMUST00000119349 807 ntBASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm26464-201ENSMUST00000157094 305 ntBASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm27989-201ENSMUST00000184721 107 ntBASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm19078-201ENSMUST00000206311 727 ntBASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smarcd3Q6P9Z1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smarcd3Q6P9Z1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Gm27838-201ENSMUST00000184829 128 ntBASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Gm9797-201ENSMUST00000052902 613 ntBASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smarcd3Q6P9Z1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm15376-201ENSMUST00000122258 783 ntBASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm15487-201ENSMUST00000122373 465 ntBASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm29608-201ENSMUST00000190444 463 ntBASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Gm29667-201ENSMUST00000190817 490 ntBASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Smarcd3Q6P9Z1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms