Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Mir874-201ENSMUST00000104769 76 ntBASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm39404-201ENSMUST00000216350 313 ntBASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.19□□□□□ -0.14
Smchd1Q6P5D8 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm14381-201ENSMUST00000122105 414 ntBASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smchd1Q6P5D8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gm8885-201ENSMUST00000189382 598 ntBASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Gm37201-201ENSMUST00000191845 523 ntBASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smchd1Q6P5D8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms