Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm27701-201ENSMUST00000184498 110 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm28911-201ENSMUST00000188837 117 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sp140Q6NSQ5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sp140Q6NSQ5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm9908-201ENSMUST00000211534 448 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm8598-201ENSMUST00000221184 836 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Sp140Q6NSQ5 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Gm45384-201ENSMUST00000210451 277 ntBASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sp140Q6NSQ5 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms