Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Frem1Q684R7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Frem1Q684R7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.33□□□□□ -0.6
Frem1Q684R7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.33□□□□□ -0.6
Frem1Q684R7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.33□□□□□ -0.6
Frem1Q684R7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Mir5120-201ENSMUST00000175020 78 ntBASIC11.33□□□□□ -0.6
Frem1Q684R7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.33□□□□□ -0.6
Frem1Q684R7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Frem1Q684R7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.33□□□□□ -0.6
Frem1Q684R7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.32□□□□□ -0.6
Frem1Q684R7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.32□□□□□ -0.6
Frem1Q684R7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.32□□□□□ -0.6
Frem1Q684R7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Matn2-206ENSMUST00000228570 2798 ntBASIC11.32□□□□□ -0.6
Frem1Q684R7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Frem1Q684R7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Frem1Q684R7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.31□□□□□ -0.6
Frem1Q684R7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Frem1Q684R7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.31□□□□□ -0.6
Frem1Q684R7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Frem1Q684R7 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Frem1Q684R7 Gm4909-201ENSMUST00000118749 794 ntBASIC11.31□□□□□ -0.6
Frem1Q684R7 Gm25043-201ENSMUST00000158604 212 ntBASIC11.31□□□□□ -0.6
Frem1Q684R7 Gm27341-201ENSMUST00000183570 106 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms