Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.03□□□□□ -0.8
Notch3Q61982 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Gm21451-201ENSMUST00000111062 2775 ntBASIC10.03□□□□□ -0.8
Notch3Q61982 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Notch3Q61982 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Notch3Q61982 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch3Q61982 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch3Q61982 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.02□□□□□ -0.8
Notch3Q61982 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Notch3Q61982 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.02□□□□□ -0.8
Notch3Q61982 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.02□□□□□ -0.8
Notch3Q61982 Gm10268-201ENSMUST00000085340 555 ntBASIC10.02□□□□□ -0.8
Notch3Q61982 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Notch3Q61982 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Notch3Q61982 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Notch3Q61982 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch3Q61982 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Notch3Q61982 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.02□□□□□ -0.8
Notch3Q61982 Gm9755-201ENSMUST00000032981 1356 ntBASIC10.02□□□□□ -0.8
Notch3Q61982 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.02□□□□□ -0.81
Notch3Q61982 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Grk6-205ENSMUST00000224653 2976 ntBASIC10.02□□□□□ -0.81
Notch3Q61982 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Notch3Q61982 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.02□□□□□ -0.81
Notch3Q61982 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Mir698-201ENSMUST00000102164 109 ntBASIC10.02□□□□□ -0.81
Notch3Q61982 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.02□□□□□ -0.81
Notch3Q61982 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Gm10146-201ENSMUST00000072739 309 ntBASIC10.02□□□□□ -0.81
Notch3Q61982 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.02□□□□□ -0.81
Notch3Q61982 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Notch3Q61982 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.02□□□□□ -0.81
Notch3Q61982 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
Notch3Q61982 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.02□□□□□ -0.81
Notch3Q61982 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Notch3Q61982 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Notch3Q61982 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Notch3Q61982 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Notch3Q61982 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.01□□□□□ -0.81
Notch3Q61982 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.01□□□□□ -0.81
Notch3Q61982 Gm17330-201ENSMUST00000221047 165 ntBASIC10.01□□□□□ -0.81
Notch3Q61982 Gm4935-201ENSMUST00000221316 1198 ntBASIC10.01□□□□□ -0.81
Notch3Q61982 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.01□□□□□ -0.81
Notch3Q61982 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.01□□□□□ -0.81
Notch3Q61982 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.01□□□□□ -0.81
Notch3Q61982 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
Notch3Q61982 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Notch3Q61982 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms