Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm19309-201ENSMUST00000218295 205 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Smarcd1Q61466 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.56□□□□□ -0.24
Smarcd1Q61466 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm7809-201ENSMUST00000153199 742 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm43133-201ENSMUST00000197472 463 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gm6013-201ENSMUST00000212264 699 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.55□□□□□ -0.24
Smarcd1Q61466 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Smarcd1Q61466 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm12291-201ENSMUST00000121627 311 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm18584-201ENSMUST00000203098 964 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm9823-201ENSMUST00000051212 327 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.54□□□□□ -0.24
Smarcd1Q61466 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcd1Q61466 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcd1Q61466 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.53□□□□□ -0.24
Smarcd1Q61466 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcd1Q61466 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms