Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six4Q61321 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.13□□□□□ -0.31
Six4Q61321 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Six4Q61321 Gm14660-201ENSMUST00000119809 575 ntBASIC13.13□□□□□ -0.31
Six4Q61321 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.13□□□□□ -0.31
Six4Q61321 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.13□□□□□ -0.31
Six4Q61321 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Six4Q61321 Gm17208-201ENSMUST00000168388 535 ntBASIC13.13□□□□□ -0.31
Six4Q61321 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six4Q61321 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.13□□□□□ -0.31
Six4Q61321 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Six4Q61321 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Six4Q61321 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Six4Q61321 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
Six4Q61321 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.12□□□□□ -0.31
Six4Q61321 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.12□□□□□ -0.31
Six4Q61321 Gm26927-201ENSMUST00000182385 965 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Gm27731-201ENSMUST00000185192 107 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Gm5186-201ENSMUST00000218781 920 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Gm10268-201ENSMUST00000085340 555 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.12□□□□□ -0.31
Six4Q61321 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Six4Q61321 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.12□□□□□ -0.31
Six4Q61321 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Six4Q61321 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Six4Q61321 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.11□□□□□ -0.31
Six4Q61321 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Gm22121-201ENSMUST00000175148 54 ntBASIC13.11□□□□□ -0.31
Six4Q61321 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Gm45784-201ENSMUST00000188360 142 ntBASIC13.11□□□□□ -0.31
Six4Q61321 Gm32025-201ENSMUST00000217960 307 ntBASIC13.11□□□□□ -0.31
Six4Q61321 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Gm19163-201ENSMUST00000223313 780 ntBASIC13.11□□□□□ -0.31
Six4Q61321 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Six4Q61321 Gm25857-201ENSMUST00000082788 129 ntBASIC13.11□□□□□ -0.31
Six4Q61321 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.11□□□□□ -0.31
Six4Q61321 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Six4Q61321 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms