Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Bdp1Q571C7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Bdp1Q571C7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Bdp1Q571C7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm14274-201ENSMUST00000117182 615 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm18463-201ENSMUST00000207258 474 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm8584-201ENSMUST00000171982 758 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.14□□□□□ -0.31
Bdp1Q571C7 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Bdp1Q571C7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.13□□□□□ -0.31
Bdp1Q571C7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.13□□□□□ -0.31
Bdp1Q571C7 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.13□□□□□ -0.31
Bdp1Q571C7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Bdp1Q571C7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Gm11979-201ENSMUST00000119629 743 ntBASIC13.12□□□□□ -0.31
Bdp1Q571C7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Bdp1Q571C7 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms