Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Srrm1Q52KI8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Gm11930-201ENSMUST00000117788 190 ntBASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Srrm1Q52KI8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm1Q52KI8 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm1Q52KI8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm1Q52KI8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Srrm1Q52KI8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Gm26361-201ENSMUST00000158868 186 ntBASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Gm45224-201ENSMUST00000208203 414 ntBASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.58□□□□□ -0.08
Srrm1Q52KI8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Srrm1Q52KI8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.57□□□□□ -0.08
Srrm1Q52KI8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.57□□□□□ -0.08
Srrm1Q52KI8 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Srrm1Q52KI8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms