Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Rc3h1Q4VGL6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Mir874-201ENSMUST00000104769 76 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm13350-201ENSMUST00000120519 479 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm7783-201ENSMUST00000204795 781 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Gm7046-201ENSMUST00000221351 977 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 AC154171.1-201ENSMUST00000224610 643 ntBASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rc3h1Q4VGL6 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm12241-201ENSMUST00000118330 726 ntBASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm2991-201ENSMUST00000173338 480 ntBASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Mospd4-201ENSMUST00000180618 576 ntBASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm38341-201ENSMUST00000195357 515 ntBASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm3961-201ENSMUST00000204425 994 ntBASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rc3h1Q4VGL6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.02■□□□□ -0
Rc3h1Q4VGL6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.02□□□□□ -0.01
Rc3h1Q4VGL6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms