Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Gm14270-201ENSMUST00000118388 846 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Gm8384-201ENSMUST00000190905 704 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Gm5449-201ENSMUST00000081132 357 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Gm26134-201ENSMUST00000178484 110 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Gm5190-201ENSMUST00000192434 357 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC7.48□□□□□ -1.21
Herc2Q4U2R1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm12461-201ENSMUST00000120231 1239 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm13315-201ENSMUST00000120376 991 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm9884-201ENSMUST00000194343 1222 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm12470-201ENSMUST00000117239 1049 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm25554-201ENSMUST00000158075 113 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm43852-201ENSMUST00000202098 917 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 AC166344.1-201ENSMUST00000223745 674 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 AC164099.1-201ENSMUST00000227780 333 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm6946-201ENSMUST00000182237 987 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm18304-201ENSMUST00000189162 546 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm44270-201ENSMUST00000203084 1234 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm5395-201ENSMUST00000121650 915 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm37452-201ENSMUST00000194416 1160 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Gm43249-201ENSMUST00000200464 458 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC7.47□□□□□ -1.21
Herc2Q4U2R1 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Herc2Q4U2R1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Herc2Q4U2R1 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms