Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ckap2Q3V1H1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm13226-201ENSMUST00000117838 404 ntBASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm8835-201ENSMUST00000173096 1169 ntBASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap2Q3V1H1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Gm12384-201ENSMUST00000119228 919 ntBASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Gm14660-201ENSMUST00000119809 575 ntBASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap2Q3V1H1 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Gm45784-201ENSMUST00000188360 142 ntBASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ckap2Q3V1H1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms