Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nhlrc4Q3UP44 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nhlrc4Q3UP44 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nhlrc4Q3UP44 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nhlrc4Q3UP44 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.96□□□□□ -0.49
Nhlrc4Q3UP44 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nhlrc4Q3UP44 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm1335-201ENSMUST00000121653 386 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm26927-201ENSMUST00000182385 965 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm43818-201ENSMUST00000200605 466 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm40466-201ENSMUST00000212174 422 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm32025-201ENSMUST00000217960 307 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nhlrc4Q3UP44 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm11425-201ENSMUST00000119608 498 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nhlrc4Q3UP44 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms