Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm27331-201ENSMUST00000183705 60 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm18187-201ENSMUST00000196476 984 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm29705-201ENSMUST00000212598 474 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Upf3bQ3ULL6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Gm12390-201ENSMUST00000117897 397 ntBASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Gm28693-202ENSMUST00000190758 331 ntBASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.94□□□□□ -0.18
Upf3bQ3ULL6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Upf3bQ3ULL6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms