Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Puf60Q3UEB3 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC17.77■□□□□ 0.44
Puf60Q3UEB3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Gm25700-201ENSMUST00000177693 110 ntBASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Puf60Q3UEB3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Puf60Q3UEB3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm4909-201ENSMUST00000118749 794 ntBASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm24845-201ENSMUST00000158034 109 ntBASIC17.76■□□□□ 0.43
Puf60Q3UEB3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Gm44262-201ENSMUST00000204969 372 ntBASIC17.76■□□□□ 0.43
Puf60Q3UEB3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Puf60Q3UEB3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Gm13813-201ENSMUST00000120998 787 ntBASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Puf60Q3UEB3 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms