Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.67□□□□□ -0.7
Trim63Q38HM4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim63Q38HM4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm5837-201ENSMUST00000191844 1369 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm10275-202ENSMUST00000168697 495 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 AC153794.1-201ENSMUST00000169148 126 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm44454-201ENSMUST00000198541 138 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm45747-201ENSMUST00000212203 999 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm10275-201ENSMUST00000092620 635 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm26848-201ENSMUST00000181052 2467 ntTSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.66□□□□□ -0.7
Trim63Q38HM4 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trim63Q38HM4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.65□□□□□ -0.7
Trim63Q38HM4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Rprl3-201ENSMUST00000157400 290 ntBASIC10.65□□□□□ -0.7
Trim63Q38HM4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.65□□□□□ -0.7
Trim63Q38HM4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.65□□□□□ -0.7
Trim63Q38HM4 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trim63Q38HM4 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trim63Q38HM4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trim63Q38HM4 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms