Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.91□□□□□ -0.34
Col9a1Q05722 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gzmn-202ENSMUST00000225535 989 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm7171-201ENSMUST00000177413 1349 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm13035-201ENSMUST00000117496 342 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm15719-201ENSMUST00000120619 635 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.9□□□□□ -0.34
Col9a1Q05722 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 Gm17611-202ENSMUST00000220613 814 ntBASIC12.9□□□□□ -0.34
Col9a1Q05722 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC12.9□□□□□ -0.34
Col9a1Q05722 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col9a1Q05722 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col9a1Q05722 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col9a1Q05722 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col9a1Q05722 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col9a1Q05722 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm15515-201ENSMUST00000117827 822 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm29615-201ENSMUST00000185371 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28224-201ENSMUST00000186078 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm29001-201ENSMUST00000186177 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28292-201ENSMUST00000186593 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28101-201ENSMUST00000187608 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm29076-201ENSMUST00000187689 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28302-201ENSMUST00000187931 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm28646-201ENSMUST00000188220 697 ntBASIC12.89□□□□□ -0.35
Col9a1Q05722 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC12.89□□□□□ -0.35
Col9a1Q05722 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms