Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.11□□□□□ -0.31
Pfdn6Q03958 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pfdn6Q03958 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm18018-201ENSMUST00000198273 408 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm45668-201ENSMUST00000211271 493 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.1□□□□□ -0.31
Pfdn6Q03958 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pfdn6Q03958 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.09□□□□□ -0.31
Pfdn6Q03958 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Gm6447-201ENSMUST00000118905 835 ntBASIC13.09□□□□□ -0.31
Pfdn6Q03958 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.09□□□□□ -0.31
Pfdn6Q03958 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pfdn6Q03958 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pfdn6Q03958 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms