Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm1335-201ENSMUST00000121653 386 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Snora73a-201ENSMUST00000082453 205 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.33□□□□□ -0.44
Nkx3-2P97503 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Nkx3-2P97503 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm2231-201ENSMUST00000125661 612 ntBASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.32□□□□□ -0.44
Nkx3-2P97503 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm19309-201ENSMUST00000218295 205 ntBASIC12.32□□□□□ -0.44
Nkx3-2P97503 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Nkx3-2P97503 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Nkx3-2P97503 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Nkx3-2P97503 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms