Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.93□□□□□ -0.66
SgcaP82350 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SgcaP82350 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SgcaP82350 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Gm13015-201ENSMUST00000118674 204 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Rprl2-201ENSMUST00000157150 290 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Gm9719-201ENSMUST00000162765 543 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Bloc1s5-203ENSMUST00000224902 612 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.92□□□□□ -0.66
SgcaP82350 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
SgcaP82350 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
SgcaP82350 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
SgcaP82350 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcaP82350 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SgcaP82350 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
SgcaP82350 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC10.91□□□□□ -0.66
SgcaP82350 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Gm5566-201ENSMUST00000116118 459 ntBASIC10.91□□□□□ -0.66
SgcaP82350 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.91□□□□□ -0.66
SgcaP82350 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Gm21470-201ENSMUST00000187680 696 ntBASIC10.91□□□□□ -0.66
SgcaP82350 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.91□□□□□ -0.66
SgcaP82350 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.91□□□□□ -0.66
SgcaP82350 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC10.91□□□□□ -0.66
SgcaP82350 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Dupd1-202ENSMUST00000224735 548 ntBASIC10.91□□□□□ -0.66
SgcaP82350 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.91□□□□□ -0.66
SgcaP82350 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
SgcaP82350 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms