Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pdlim4P70271 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.88□□□□□ -0.67
Pdlim4P70271 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.88□□□□□ -0.67
Pdlim4P70271 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pdlim4P70271 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.87□□□□□ -0.67
Pdlim4P70271 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.87□□□□□ -0.67
Pdlim4P70271 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Pdlim4P70271 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Gm16372-201ENSMUST00000073088 450 ntBASIC10.87□□□□□ -0.67
Pdlim4P70271 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pdlim4P70271 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.87□□□□□ -0.67
Pdlim4P70271 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.87□□□□□ -0.67
Pdlim4P70271 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pdlim4P70271 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pdlim4P70271 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gm5687-201ENSMUST00000118252 640 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gm27486-201ENSMUST00000184923 80 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.86□□□□□ -0.67
Pdlim4P70271 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.86□□□□□ -0.67
Pdlim4P70271 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.86□□□□□ -0.67
Pdlim4P70271 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pdlim4P70271 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms