Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.2□□□□□ -0.46
Six5P70178 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.2□□□□□ -0.46
Six5P70178 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Six5P70178 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.2□□□□□ -0.46
Six5P70178 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.2□□□□□ -0.46
Six5P70178 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.2□□□□□ -0.46
Six5P70178 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.2□□□□□ -0.46
Six5P70178 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Six5P70178 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.2□□□□□ -0.46
Six5P70178 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Six5P70178 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Six5P70178 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Six5P70178 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.19□□□□□ -0.46
Six5P70178 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm11637-201ENSMUST00000120601 592 ntBASIC12.19□□□□□ -0.46
Six5P70178 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm8810-201ENSMUST00000172895 754 ntBASIC12.19□□□□□ -0.46
Six5P70178 Gm8652-201ENSMUST00000181363 964 ntBASIC12.19□□□□□ -0.46
Six5P70178 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.19□□□□□ -0.46
Six5P70178 Gm6458-201ENSMUST00000211573 635 ntBASIC12.19□□□□□ -0.46
Six5P70178 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.19□□□□□ -0.46
Six5P70178 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.19□□□□□ -0.46
Six5P70178 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.19□□□□□ -0.46
Six5P70178 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.19□□□□□ -0.46
Six5P70178 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Six5P70178 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.18□□□□□ -0.46
Six5P70178 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.18□□□□□ -0.46
Six5P70178 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Mir686-201ENSMUST00000102174 109 ntBASIC12.18□□□□□ -0.46
Six5P70178 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.18□□□□□ -0.46
Six5P70178 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.18□□□□□ -0.46
Six5P70178 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.18□□□□□ -0.46
Six5P70178 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.18□□□□□ -0.46
Six5P70178 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Gm37497-201ENSMUST00000195830 798 ntBASIC12.18□□□□□ -0.46
Six5P70178 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.18□□□□□ -0.46
Six5P70178 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Six5P70178 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms